EMPIRE 3D MRE

v1.0.0

by FORGE Team

MATLABPython✓ Verified

3D Magnetic Resonance Elastography reconstruction pipeline for the EMPIRE pulse sequence. MATLAB preparation, FORGE SENSE reconstruction, harmonic wave extraction, HD-BET brain masking, and MRE inversion.

#mre#elastography#3d#empire

Install

In FORGE Studio, open Settings → Packs → Get forgepacks, find EMPIRE 3D MRE, and click Install. The app verifies the download against the checksum below before extracting.

Or download the archive directly: empire-3d-mre-1.0.0.forgepack (16 KB)

Requirements

FORGE binaries: forgeSense
MATLAB toolboxes: image_processing

External MATLAB code (not bundled — you must provide it):

magneto — MRI reconstruction toolbox providing the EMPIRE prep functions (RecoIL)
functions: recoInfo, gridCoilImagesCal, combineCoilsInati3D, fieldCorrectedReconCal, convertRecoInfoToIsmrmrd

What runs on your machine

This pack ships executable code. Review it before installing:

matlab/extractWaves.m
matlab/mre_wave.m
matlab/prepEmpire.m
python/hd_bet_masking.py

Details

Version	1.0.0
Author	FORGE Team
License	MIT
Min. FORGE Studio	0.2.0
Size	16 KB
Published	Jun 8, 2026
SHA-256	`4583ce1913a6968b70d32a281630b2a77d1ed8f1261ede3c773e5ac40a545ca6`